Photosynthesis Simulator — Glucose-equivalent net rate, Accumulated carbohydrate equivalent & Net O₂ production Interactive

A chloroplast cutaway shows stacked thylakoids, light absorption, water oxidation, proton movement and ATP synthase.

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About this tool — how it works & FAQ

About the Photosynthesis Simulator

A chloroplast cutaway shows stacked thylakoids, light absorption, water oxidation, proton movement and ATP synthase. Follow ATP and NADPH into a separate Calvin-cycle ring in the stroma.

What the simulator shows

• 3D scene parts: Chloroplast envelope; grana / thylakoid membranes; light capture / water oxidation; atp synthase and proton path; calvin cycle in stroma. • Controls: Relative incident light (0–1 fraction); Relative CO₂ availability (0–1 fraction); Block photosynthetic electron transport. • Live readouts: Glucose-equivalent net rate (units/s); Accumulated carbohydrate equivalent (units); Net O₂ production (units); CO₂ fixed (units). • Guided experiments: No light; CO₂ limited. • Four tabs (visual laboratory, curves and measurements, experiments, learn and assess), a model-verification run, a timestamped event log and a trial report.

The model equations

Net teaching balance: 6CO₂ + 6H₂O + light → C₆H₁₂O₆ + 6O₂ Rate = min(light, CO₂ availability), or zero if transport blocked O₂ produced = CO₂ fixed = 6 × glucose equivalent

Model limits and how to explore

Molecular geometry, organelle dimensions and animation time are enlarged and illustrative. Colors identify structures rather than natural tissue color. This is a conceptual teaching model, not a cell physiology predictor. This is a steady-state stoichiometric teaching balance with no energy pools, kinetics, photorespiration or photon/ATP stoichiometry. The Calvin cycle produces triose phosphate; glucose is a net accounting equivalent. Try the preset experiments, then compare the live readouts with the equations.

Frequently asked questions

Does the animation show literal molecular dimensions and timing?

No. Geometry is enlarged and time is a teaching playback scale.

Where does photosynthetic oxygen originate?

Water.

What does this simulator not model?

Molecular geometry, organelle dimensions and animation time are enlarged and illustrative. Colors identify structures rather than natural tissue color. This is a conceptual teaching model, not a cell physiology predictor. This is a steady-state stoichiometric teaching balance with no energy pools, kinetics, photorespiration or photon/ATP stoichiometry. The Calvin cycle produces triose phosphate; glucose is a net accounting equivalent.

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